package 0000000, https://legacy.envipath.org/package/5b6e1db7-c586-4906-a7d3-c1193c6388e0, no description
Eawag-Soil (Without Scenarios, DT50s and Multistep Reactions), https://legacy.envipath.org/package/d817c31c-d879-44c8-913d-2963d42f8203, "EAWAG-SOIL" package contains pathway information from soil degradation studies, stored in a biotransformation reaction scheme in the object <a href="https://legacy.envipath.org/package/3929925e-b71c-4c92-bc59-281a0b595cd2/pathway" target="_blank">pathway</a>. This information is extracted from pesticide registration dossiers (draft assessment reports, DAR) made publically available through the European Food Safety Authority (<a href="http://dar.efsa.europa.eu/dar-web/provision" target="_blank">EFSA</a>). The package also contains information on different experimental conditions that are stored in the object <a href="https://legacy.envipath.org/package/3929925e-b71c-4c92-bc59-281a0b595cd2/scenario" target="_blank">scenario</a>. <a href="https://legacy.envipath.org/package/5882df9c-dae1-4d80-a40e-db4724271456/compound" target="_blank">Compounds</a> in the pathway are associated with a given <a href="https://legacy.envipath.org/package/3929925e-b71c-4c92-bc59-281a0b595cd2/scenario" target="_blank">scenario</a> if they have been observed under the specific experimental conditions. If available, a biotransformation half-life (DT50) value is additionally associated with a given compound in the pathway and a specific scenario. More details concerning enviPath conventions that were used to store specific data from DAR, and their description can be found in our <a href="https://legacy.envipath.org/wiki/index.php/EAWAG-SOIL_package" target="_blank">wiki</a>.
bbd soil,sludge, https://legacy.envipath.org/package/50cacc78-a2f6-478b-9688-b570f010d3e0, fluroquinolone
Biodegradation Lab , https://legacy.envipath.org/package/afc745d6-899a-4d3c-88f5-4cdfffae9f2b, Pathway for part 1 of the biodegradation lab
anonymous, https://legacy.envipath.org/package/650babc9-9d68-4b73-9332-11972ca26f7b, no description
EAWAG-BBD-without-rules (successfully imported from JSON on 2023-11-24 14:05), https://legacy.envipath.org/package/c0a14137-5a5a-4425-b80a-ab3df623bc99, Migration package for pathways, reactions and compounuds from the EAWAG-BBD database. It contains no rules or scenarios.
Test Package, https://legacy.envipath.org/package/3930aabc-b7aa-46a1-bbb0-38e5c4f81ae5, This package is created as a tutorial for enviPath-python documentation!
Perfluorooctanoic Acid (PFOA), https://legacy.envipath.org/package/42008319-8305-4377-9d7a-e7fc750ea63f, no description
Test Package, https://legacy.envipath.org/package/6e3fb8b9-a156-4a8a-a370-ebaf0cdc1799, This package is created as a tutorial for enviPath-python documentation!
slang03 - test 1, https://legacy.envipath.org/package/d4e4f03a-a266-4442-83dc-2843b03eda37, no description
pfas_pathway_fold_1, https://legacy.envipath.org/package/41de54a0-2771-44ce-98d8-b3b230debf13, no description
EAWAG-SLUDGE, https://legacy.envipath.org/package/521c547a-fd2a-491c-ad5b-7eaa1577fb65, The <a href="https://legacy.envipath.org/package/521c547a-fd2a-491c-ad5b-7eaa1577fb65">EAWAG-SLUDGE</a> package contains pathways and kinetic information about microbially mediated transformation processes in biological wastewater treatment. The information was extracted from scientific publications in different journals. The biotransformation reaction schemes are stored as <a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/pathway">pathways</a>. The experimental conditions and additional information (e. g. sludge source) are collected in the <a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/scenario">scenario</a> objects. Any observed transformation products (<a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/compound">compounds</a>) are linked to their corresponding experimental metadata (<a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/scenario">scenario</a>). Kinetic parameters (rate constants and/or half-lives) including corresponding scenarios are indicated for compounds for which such data is available. More details regarding enviPath conventions can be found in our <a href="https://wiki.envipath.com/index.php/Main_Page">wiki</a>.
Pathways_Xuejian_Wang, https://legacy.envipath.org/package/51147f95-0101-4d12-beab-66fee17dadc9, no description
EAWAG-SOIL, https://legacy.envipath.org/package/5882df9c-dae1-4d80-a40e-db4724271456, "EAWAG-SOIL" package contains pathway information from soil degradation studies, stored in a biotransformation reaction scheme in the object <a href="https://legacy.envipath.org/package/5882df9c-dae1-4d80-a40e-db4724271456/pathway" target="_blank">pathway</a>. This information is extracted from pesticide registration dossiers (draft assessment reports, DAR) made publically available through the European Food Safety Authority (<a href="https://www.efsa.europa.eu/en/calls/consultations" target="_blank">EFSA</a>). The package also contains information on different experimental conditions that are stored in the object <a href="https://legacy.envipath.org/package/5882df9c-dae1-4d80-a40e-db4724271456/scenario" target="_blank">scenario</a>. <a href="https://legacy.envipath.org/package/5882df9c-dae1-4d80-a40e-db4724271456/compound" target="_blank">Compounds</a> in the pathway are associated with a given <a href="https://legacy.envipath.org/package/5882df9c-dae1-4d80-a40e-db4724271456/scenario" target="_blank">scenario</a> if they have been observed under the specific experimental conditions. If available, a biotransformation half-life (DT50) value is additionally associated with a given compound in the pathway and a specific scenario. More details concerning enviPath conventions that were used to store specific data from DAR, and their description can be found in our <a href="https://wiki.envipath.org/doku.php?id=packages#eawag-soil" target="_blank">wiki</a>.
pfas_rxns_fold_5, https://legacy.envipath.org/package/1e8d5508-0451-4b6d-9da6-7c748a122f7d, no description
EAWAG-BBD (rules only) 062821 (successfully imported from JSON on 2021-06-28 11:51), https://legacy.envipath.org/package/fbf5a021-af64-4e86-9a4c-09cb2863d55d, Rules of BBD
package 0000000, https://legacy.envipath.org/package/53421366-e720-4b2c-b25a-e8e9c95ecb26, no description
EAWAG-BBD-SOIL-combined-rules-only-080221 (successfully imported from JSON on 2022-08-22 12:44), https://legacy.envipath.org/package/55fa3a97-db19-442f-8108-954f7be95e1c, Combined Rules of EAWAG-BBD and EAWAG-SOIL
Relative Reasoning Models 2022, https://legacy.envipath.org/package/308fc905-f84d-410b-b3ca-ed888d59dd33, These models were used to perform the prediction in the publication by Trostel et al., 2023.
BHMF, https://legacy.envipath.org/package/456190b3-855e-42ca-a0ed-3593d4a690c3, no description
TP predictions TFA (BBD, top 50), https://legacy.envipath.org/package/13a02b3f-3353-46cf-a9d2-242f53a0bf85, TP predictions for TFA-containing compounds (BBD model, max 50 TPs)
Package 1, https://legacy.envipath.org/package/4cd11c0d-8d4f-44d5-845b-8db37f5ed51d, no description
pfas_pathway_fold_2, https://legacy.envipath.org/package/fd9fe809-4d30-42d9-a4c7-3a2c9e2dc517, no description
EAWAG-SLUDGE 2022, https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038, The <a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038">EAWAG-SLUDGE</a> package contains pathways and kinetic information about microbially mediated transformation processes in biological wastewater treatment. The information was extracted from scientific publications in different journals. The biotransformation reaction schemes are stored as <a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/pathway">pathways</a>. The experimental conditions and additional information (e. g. sludge source) are collected in the <a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/scenario">scenario</a> objects. Any observed transformation products (<a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/compound">compounds</a>) are linked to their corresponding experimental metadata (<a href="https://legacy.envipath.org/package/4a3cd0f4-4d2b-4f00-b3e6-a29e721f7038/scenario">scenario</a>). Kinetic parameters (rate constants and/or half-lives) including corresponding scenarios are indicated for compounds for which such data is available. More details regarding enviPath conventions can be found in our <a href="https://wiki.envipath.com/index.php/Main_Page">wiki</a>.
TP prediction with BBD+SOIL - ML - ECC - 2022, https://legacy.envipath.org/package/80cf58b1-21e2-4c28-9cc6-dc69c6445bdf, Package for TP prediction results on pharmaceuticals using BBD+SOIL - ML - ECC - 2022 model
TP prediction with BBD - ML - ECC - 2022, https://legacy.envipath.org/package/0915fad3-b889-4aa8-ac98-0707b717be57, Package for TP prediction results on pharmaceuticals using BBD - ML - ECC - 2022 model
pfas_rxns_fold_3, https://legacy.envipath.org/package/235ea749-244d-465f-830e-341b7bc7c752, no description
pfas_rxns_fold_4, https://legacy.envipath.org/package/1a1600ef-dc84-4326-ad99-671f28d9717c, no description
pfas_pathway_fold_3, https://legacy.envipath.org/package/34996a37-59b4-42c3-baf9-30c8e65bf66c, no description
pfas_pathway_fold_5, https://legacy.envipath.org/package/4397eba5-3b9c-4f08-b631-c4d041943216, no description
flurin_jenny_2, https://legacy.envipath.org/package/a4ddce2a-ef80-44a7-963d-1f08d9a44ed9, no description
enviPath-PFAS, https://legacy.envipath.org/package/d2cfb5af-4ea0-4375-9a48-f2e776e44636, A collection of literature-reported biotransformation pathways for per- and polyfluorinated alkyl substances (PFASs). Last updated on January 7th 2026.
Eawag-Soil (only new set of rules), https://legacy.envipath.org/package/7983cb64-f580-42ba-8776-8fdace4ad7dc, no description
package 0000000, https://legacy.envipath.org/package/4006cc5f-176c-41a0-b41b-a17213fbf804, no description
gpapa, https://legacy.envipath.org/package/77447530-7db9-49d0-b4c3-7199ade1f3a8, no description
package 0000000, https://legacy.envipath.org/package/56a455b8-6c9e-4082-815b-6ab2733f9152, no description
TP prediction with BBD+SOIL+SLUDGE - ML - ECC - 2022, https://legacy.envipath.org/package/11f2acd5-5209-4d49-ad77-93f6f6965886, Actions Package for TP prediction results on pharmaceuticals using BBD+SOIL+SLUDGE - ML - ECC - 2022 model
c13 Package, https://legacy.envipath.org/package/9a0504cc-07f6-496c-bd13-6b5f261cee40, This package is created as a tutorial for enviPath-python documentation!
package 0000000, https://legacy.envipath.org/package/c65a50e1-77a5-456c-b382-5296f247df71, no description
TP prediction with BBD+SLUDGE - ML - ECC - 2022, https://legacy.envipath.org/package/7d64aa85-2e3c-413f-a538-4d5f2bfd4662, Package for TP prediction results on pharmaceuticals using BBD+SLUDGE - ML - ECC - 2022 model
pfas_pathway_fold_4, https://legacy.envipath.org/package/9977c7c3-dec4-441d-b595-1603ba8cb398, no description
Holl Package, https://legacy.envipath.org/package/34a5d273-cf25-4228-b26f-1d72261fde94, no description
LMDavis2026, https://legacy.envipath.org/package/0ba96e87-d678-46f9-bc8f-9e61ef0f298f, Keep the streets clean
PFAS_rules, https://legacy.envipath.org/package/d63cfa60-7ecc-4546-8eeb-0fe79c66c3c0, no description
REF, https://legacy.envipath.org/package/6564deab-1474-48c9-8f22-a53d922a6b5d, no description
EAWAG-BBD, https://legacy.envipath.org/package/32de3cf4-e3e6-4168-956e-32fa5ddb0ce1, Migration package for pathways, reactions and compounds from the EAWAG-BBD database
Carr Package, https://legacy.envipath.org/package/32f6e826-bd4f-4700-8725-c44d9b983a34, codeine
congored_m.o_degardation, https://legacy.envipath.org/package/cd1f3f3e-eba6-47e9-b42b-530580756490, no description
package 0000000, https://legacy.envipath.org/package/e7a790f9-00c2-498a-b21b-2cf7258654cd, no description
4‑Chlorobenzoate, https://legacy.envipath.org/package/85c72587-6141-4c24-9880-4dff3b3390f1, 4-Chlorobenzoate
Test 1, https://legacy.envipath.org/package/95aeb3b3-7b39-463f-855e-e9c4ec81a1b2, Test 1
biodegradation project, https://legacy.envipath.org/package/3a296b56-99e0-4143-8d47-18f3075497e4, no description
Beantree, https://legacy.envipath.org/package/55563f43-222e-4753-82fa-ab67f054b827, no description
pfas_rxns_fold_2, https://legacy.envipath.org/package/4bfe0d83-bc42-4fae-b674-63bacd7c7242, no description
2-Methylisoborneol, https://legacy.envipath.org/package/ad95c439-f1bc-4a0d-9bfb-8264c20006de, Engineered version of anonymous
test_pkg_readedges, https://legacy.envipath.org/package/61d37b7d-2796-43e0-b718-1f68b044d69e, test
congored_m.o_degardation, https://legacy.envipath.org/package/b445b81a-452f-43a2-a67e-56ae706db021, congo red as parent compound
777, https://legacy.envipath.org/package/e0b29e97-b104-4b1a-93af-d15c02af97fb, 774
enviPath-PFAS_BBD_SOIL, https://legacy.envipath.org/package/6768f381-2503-41d4-922b-15da62fc5bf6, Merging enviPath-PFAS with EAWAG-BBD and EAWAG-SOIL
package 0000000, https://legacy.envipath.org/package/5622bee7-88c3-41e6-acd8-b13a5a002abf, no description
Test Package, https://legacy.envipath.org/package/94719d3d-34cb-43f3-ace3-d41ba5afd809, This package is created as a tutorial for enviPath-python documentation!
45, https://legacy.envipath.org/package/030cc7c4-77d7-40c9-ba94-ac0ce261251f, no description
Test_package, https://legacy.envipath.org/package/31f545f7-e0b6-464c-8c2d-da75865ba3db, no description
β-cyfluthrin pathway, https://legacy.envipath.org/package/4ff55a2a-7dc5-443e-8ae4-42d729dec114, &#946;-cyfluthrin pathway for two proposed mechanisms for the degradation of the compound to 1,3-benzenedicarboxylic acid and phenol, of which phenol can continue into the TCA cycle. While no enzymes were directly uncovered, a microbial consortium consisting of <i>Enterobacter, Microbacterium, Ochrobactrum, Pseudomonas, Hyphomicrobiaceae, Achromobiaceae, Achromobacter,</i> etc. was utilized. Additional species identified to be involved in this pathway are <i>Bacillus Cereus</i>. The first step is hydrolyzing the pyrethroid structure via a hydrolase (EC 3.1.1.X) most likely from <i>Enterobacter</i> into either side of the proposed pathway, then moving through yet to be confirmed enzymes such as various lyases, esterases, decarboxylases, dehydrogenases, and others to result in a structures safe for the environment that have been incorporated into this consortium&#39;s metabolism.<br><br> Li, H.; Yachun, M.; Tuo, Y.; Li, M.; Jiangui, Z.; Changning, L. Biodegradation Pathway and Detoxification of &#946;-cyfluthrin by the Bacterial Consortium and Its Bacterial Community Structure. <i>Journal of Agricultural and Food Chemistry</i>. 2022, 70(25), 7626-7635. <a href="https://doi.org/10.1021/acs.jafc.2c00574">Li et al.</a> <br><br> Maloney, S. E.; Maule, A.; Smith, A.R. Purification and Preliminary Characterization of Permethrinase from a Pyrethroid-Transforming Strain of <i>Bacillus Cereus</i>. <i>Applied Environmental Microbiology</i>. 1993, 59(7).  <a href="https://doi.org/10.1128/aem.59.7.2007-2013.1993">Maloney et al.</a>
EAWAG-SLUDGE 2023, https://legacy.envipath.org/package/7932e576-03c7-4106-819d-fe80dc605b8a, The <a href="https://legacy.envipath.org/package/7932e576-03c7-4106-819d-fe80dc605b8a">EAWAG-SLUDGE</a> package contains pathways and kinetic information about microbially mediated transformation processes in biological wastewater treatment. The information was extracted from scientific publications in different journals. The biotransformation reaction schemes are stored as <a href="https://legacy.envipath.org/package/7932e576-03c7-4106-819d-fe80dc605b8a/pathway">pathways</a>. The experimental conditions and additional information (e. g. sludge source) are collected in the <a href="https://legacy.envipath.org/package/7932e576-03c7-4106-819d-fe80dc605b8a/scenario">scenario</a> objects. Any observed transformation products (<a href="https://legacy.envipath.org/package/7932e576-03c7-4106-819d-fe80dc605b8a/compound">compounds</a>) are linked to their corresponding experimental metadata (<a href="https://legacy.envipath.org/package/7932e576-03c7-4106-819d-fe80dc605b8a/scenario">scenario</a>). Kinetic parameters (rate constants and/or half-lives) including corresponding scenarios are indicated for compounds for which such data is available. More details regarding enviPath conventions can be found in our <a href="https://wiki.envipath.com/index.php/Main_Page">wiki</a>.
package 0000000, https://legacy.envipath.org/package/e7abece4-39a1-4f07-8aa0-ec1cec850746, no description
PFAS_Copy, https://legacy.envipath.org/package/b188fb6e-9e6d-41be-9ccc-3355b179f2fe, Private copy of PFAS package for model training
License Test, https://legacy.envipath.org/package/79127cc5-4c25-45d6-a218-a30b75b6111d, Test
ITN-training-EAWAG-2022, https://legacy.envipath.org/package/ed630731-44c2-48eb-8b6e-bae5fac6f637, This package contains predicted pathways of ITN practice
ehorsley, https://legacy.envipath.org/package/f5ffc279-769a-4e0e-80c2-0a11d59d0fbf, no description
Chlorobenzene to Phenol to Catechol, https://legacy.envipath.org/package/85f998e9-335e-436e-b21b-074ee1aa8584, no description
flurin_jenny, https://legacy.envipath.org/package/bd8da881-bc92-4dec-b991-d7e997816209, no description
package 0000000, https://legacy.envipath.org/package/6b725322-fe08-4aa7-8cea-465dbfe02ce8, no description
pfas_rxns_fold_1, https://legacy.envipath.org/package/a768dd1f-b737-4fd3-b803-bd1da1eafbd1, no description
enviPath-PFAS-2025, https://legacy.envipath.org/package/d2d2410f-43e9-401d-b190-20862baed780, A collection of literature-reported biotransformation pathways for per- and polyfluorinated alkyl substances (PFASs). Last updated on July 9th 2025.
Ricarda, https://legacy.envipath.org/package/316392a8-7d1c-4ef5-ab8a-25b8b3e3870e, Test_degradation
Demo SIB, https://legacy.envipath.org/package/4fd7f3e0-dd25-43ac-9453-dda3e52396e4, no description
Copy Pathway Test, https://legacy.envipath.org/package/7b1f2aa6-6c1e-441d-bb48-a9f38a7064cb, no description
EAWAG-SEDIMENT, https://legacy.envipath.org/package/f05e38d8-e9b4-4c3e-b0d8-9ab29966eccf, The "EAWAG-SEDIMENT" package contains pathways and kinetic data from biodegradation studies performed in water-sediment systems. This information is extracted from pesticide registration dossiers (draft assessment reports, DAR) made publically available through the European Food Safety Authority (<a href="https://www.efsa.europa.eu/en/calls/consultations" target="_blank">EFSA</a>). The package also contains information on different experimental conditions that are stored in the object <a href="https://legacy.envipath.org/package/f05e38d8-e9b4-4c3e-b0d8-9ab29966eccf/scenario" target="_blank">scenario</a>. <a href="https://legacy.envipath.org/package/f05e38d8-e9b4-4c3e-b0d8-9ab29966eccf/compound" target="_blank">Compounds</a> in the pathway are associated with a given <a href="https://legacy.envipath.org/package/f05e38d8-e9b4-4c3e-b0d8-9ab29966eccf/scenario" target="_blank">scenario</a> if they have been observed under the specific experimental conditions. If available, a total system biotransformation half-life (DT50) value is associated with a given compound in the pathway and a specific scenario, along with dissipation half-lives from the water and the sediment phases.
Multi-Step Rules, https://legacy.envipath.org/package/6e470eef-b954-41a1-8c61-8ccdf9a8544a, The package contains only composite sequential rules that can be associated to a reaction. The combined simple rules themselves are i.g. not part of this package.
test_again_241029, https://legacy.envipath.org/package/2b75768e-1805-498f-8077-85fa914c98c5, no description
package 0000000, https://legacy.envipath.org/package/864856fa-f732-4417-9470-7891260dc8a5, no description
package 0000000, https://legacy.envipath.org/package/087b6558-b02e-4c68-a79d-9c180bf19d40, no description
Test_transfer, https://legacy.envipath.org/package/32744405-dfde-4216-bd93-41870a585ab4, Pathway transfer
congored_m.o_degardation, https://legacy.envipath.org/package/301ef753-a01b-468e-8ef4-0c06b4ea7ea9, no description
package 0000000, https://legacy.envipath.org/package/4daa8be1-4a18-4d95-87ed-8a1ce092f89b, no description